PTFI Visualization
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UMAP Dashboard from TSV
Load a TSV file or paste TSV text, then filter, recolor, resize, and inspect points.
Expected fields: compound, structure, subcategory, status, food, concentration, UMAP1, UMAP2
Data input
Upload TSV file
Or paste TSV
Load data
Load example
Display
Color by
Symbol by
Size by
Base point size
Opacity
Size scale
Cluster compression (< 1 = pull clumps together, 1.0 = normal, > 1 = push apart)
Show point labels (compound)
Transform
None
Log (log₁₀)
Natural log (ln)
Square root
Cube root
Power (x²)
Cube (x³) - spreads more
Tanh - spreads middle values
Sign-preserving x² - spreads w/ negatives
Reciprocal (1/x)
Exponential (eˣ)
Axis Scaling
X-axis scale
Y-axis scale
Filters
Text search
Min concentration
Max concentration
Food
Select all
Clear
Subcategory
Select all
Clear
Status
Select all
Clear
Apply filters
Reset filters
Total rows
0
Plottable rows
0
Foods
0
Subcategories
0
Structure preview
Compound
None selected
SMILES
Hover over or click a point to preview its structure.
Preview status
Waiting for a point selection.
Hover updates the preview. Click pins the current molecule.
Filtered rows preview
compound
structure
food
subcategory
status
concentration
UMAP1
UMAP2
Hover points for full details including structure.